Applesauce Banana Muffins are naturally sweetened and made easy in one bowl. Moist and delicious healthy banana muffins your family will love for breakfast or snack.
Other favorite banana muffins include these almond flour banana muffins and kodiak banana muffins.

When it comes to baked goods, simplicity is key. These healthy banana muffins with applesauce, whole wheat flour and no refined sugar win every-single-time. Along with applesauce banana bread, they are our family favorite and I can guarantee they will be yours too!
Why You’ll Love This Recipe

- Low fat: Banana applesauce muffins do not need much oil or butter thanks to applesauce.
- Low sugar: Naturally sweetened with ripe bananas and a touch of maple syrup, these healthy muffins contain only 10 grams of sugar.
- Whole grain: Using 100% whole wheat flour or spelt flour adds both fiber and nutrients you don’t get with white flour.
- Easy recipe: Made in one bowl, with simple ingredients.
- Light and fluffy: Both adults and kids love these banana muffins with applesauce!
Reader’s Review
These are so good! I used maple syrup (not honey) and sprinkled them with chopped honey roasted pecans and a cinnamon and sugar mix before baking. They are so moist and delicious!!
Traci Marschalk
Ingredients for Applesauce Banana Muffins

- Bananas: Choose very ripe bananas that are yellow with many brown spots to brown patches. Here is a quick tutorial how to ripen bananas faster if your bananas are not quite there yet. Previously frozen bananas are OK too, just make sure to thaw them first.
- Flour: I have tested this recipe with whole wheat flour and spelt flour. You should be OK with white whole wheat flour or whole wheat pastry flour in same amount.
- Sweetener: Maple syrup, honey, agave or any other liquid sweetener works.
- Applesauce: Either sweetened or I like to use unsweetened applesauce, it adds moisture and sweetness. You can substitute it with 2% and higher fat Greek yogurt but keep in mind your banana muffins will be less sweet. Add a touch more sweetener or just make my Greek yogurt banana muffins.
- Egg: For lift and binding. You may try to replace it with a flax egg or chia egg.
- Oil: Avocado oil, olive oil, grapeseed oil works. Coconut oil is great too although it has to be melted first and then measured. A little bit of oil is necessary to avoid rubbery texture.
- Baking staples: Baking soda and baking powder for leavening, and salt for taste.
- Vanilla: Pure vanilla extract for extra flavor. You can also add 1 teaspoon of cinnamon for warmth.
How to Make Banana Applesauce Muffins
This healthy banana muffin recipe comes together in less than 30 minutes.

- Combine wet ingredients and leavening agents: In a large bowl, lightly whisk an egg. Add bananas and mash well with a potato masher. Add applesauce, maple syrup, oil, vanilla, baking powder and soda and salt, then whisk to combine or I use the same masher to “whisk”.

- Add flour and gently stir until well incorporated. Give the muffin batter a few stirs and let it sit for a few seconds. Then stir in a different direction again. Try to stir from the very bottom to avoid patches of flour in the muffins.

- Bake the muffins: Using a trigger cookie dough scoop, fill each muffin pan opening with batter almost full. Bake banana muffins for 22 minutes in preheated 375 F degrees oven.

- Cool the muffins: After baking, let banana muffins cool for about 5 minutes and then transfer to a cooling rack to cool off completely.
Tips for Best Results
- Follow the recipe: Dry to wet ingredients ratio has to be maintained. Do not use dry sweetener like brown sugar or white granulated sugar, please.
- Other flours: If you want to use all-purpose flour, I recommend 1 3/4 cups. Do not use coconut flour because all flours act differently. For gluten free versions, check out my almond flour banana muffins and oat flour banana muffins.
- Do not over mix the batter: Vigorous mixing will result in gluten development in the flour. Banana applesauce muffins will come out rubbery and tough.
- Muffin tin liners: Be sure to use parchment paper liners and not just paper liners to prevent sticking. If using no liners, be sure to spray your muffin tin well and make sure it is truly non-stick one.
- To avoid sinking in the center muffins: Measure 1 1/2 cups of mashed banana, use fresh baking powder and next time add a tad more flour, if you had collapsed centers.
Variations
You can add 1/2 cup to 1 cup of these add-ins without any other changes to the recipe.
- Nuts: Chopped or in pieces walnuts, pecans, almonds, or pistachios.
- Chocolate chips: Mini chocolate chips would go a long way and you will have to use less of them.
- Blueberries: Fresh blueberries or frozen blueberries work great. You might love my healthy blueberry banana muffins too!
- Dried fruit: Raisins or dried cranberries.
- To make mini banana muffins: Bake mini banana muffins for 15 minutes and do a toothpick test. If it comes out with muffin batter on it, bake longer, if necessary.
- Would you like a banana bread? Check out my banana bread with applesauce.
How to Store
Store: To prevent banana muffins from drying out, place in a resealable bag or airtight container and store muffins on a counter for 3 days. Afterwards if any left (never happens to us), refrigerate for another 3 days.
Freeze: Bake and cool the muffins and freeze the same day to ensure freshness. Freeze muffins for up to 3 months. To thaw just remove banana muffins from the freezer and let defrost in a bag for a few hours or overnight on a counter.
More Banana Muffin Recipes to Try
- Greek yogurt banana muffins
- Banana carrot muffins
- Healthy banana oatmeal muffins
- Banana protein muffins
- Pumpkin banana muffins
- Healthy banana chocolate chip muffins


Applesauce Banana Muffins
Equipment
Video
Ingredients
- 1 large egg
- 3 large very ripe bananas, 1 1/2 cups mashed
- 1/2 cup applesauce, sweetened or unsweetened
- 1/4 cup maple syrup, or honey
- 3 tablespoons mild oil, I use avocado oil
- 1 teaspoon pure vanilla extract
- 1 teaspoon baking powder
- 1/2 teaspoon baking soda
- 1/4 teaspoon salt
- 1 1/3 cups whole wheat or spelt flour
- Cooking spray, I use Misto
Instructions
- Preheat oven to 375 degrees F and spray non-stick 12 muffin tin with cooking spray. Set aside.
- In a large mixing bowl, lightly whisk the egg. Add bananas and mash well. Add applesauce, maple syrup, oil, vanilla, baking powder and soda and salt; whisk to combine.
- Add flour and gently stir until well incorporated. Do not over mix otherwise muffins will be tough.
- Fill each opening almost full with batter (I used regular ice cream scoop) and bake for 22 minutes or until a toothpick inserted in the centre comes out clean.
- Let muffins cool for about 5 minutes and then transfer to a cooling rack to cool off completely.
Notes
- Store: Refrigerate in an airtight container for up to 1 week.
- Freeze: In an airtight container or bag for up to 3 months. Thaw on a counter for a few hours or overnight.
Nutrition
Nutrition information is automatically calculated, so should only be used as an approximation.














Thanks for the great recipe! Just made these into minis, and they came out absolutely perfect. Half the batch was for my little, and the other half was mine. My half got some chocolate chips. Let me just tell you, they are magical! She’s dancing around eating one of hers, and I’m closing the same with mine! Thanks again!!
You are welcome. These along with whole wheat chocolate muffins are my kids’ favourite muffins!
I have fructose malabsorption and cannot have applesauce. Is there anything else that can be substituted without a big sugar or calorie change?
I think Greek yogurt should work. Just don’t use 0%, 2% and higher.
Hi! Could I use coconut oil instead of olive oil? And if I use the paper like the picture, will I have to spray the paper? Thanks!
Hi Claudia. Yes, you can use melted coconut oil and yes you will have to spray those paper liners. Have fun!:)
I love these muffins! perfect for when I’ve let a few bananas get too ripe. making them for the third time today 🙂 Thanks for the recipe!
These are amazing! I didn’t have any applesauce, so I used one of my daughters apple, blueberry, and oat baby fruit pouch. They turned out soft and sweet.
Yes, fruit puree would work because it contains the same necessary acid and consistency. Great!
I made this muffins this week using Bob’s Red Mill Gluten Free Flour and my whole family loved them even the gluten eaters. 1/2 of the recipe I added mini chocolate chips. Thanks, this is going to be my go to banana muffin recipe especially for after school snacks.
Awesome. I have always wanted to try the flour but can’t justify the price since we do not have Celiac. If it comes out at Costco again (it used to) I’m buying it. I always always make these muffins for after school snacks, kids love them with CC of course.
I have made these for my family so many times and they have been a hit each time! unlike other clean eating recipes these are super moist and flavorful! Thanks so much for the recipe and will for sure be making these muffins for years to come.
You are so welcome, Aviah! These banana muffins and my whole wheat chocolate muffins I make over and over again!
Super interested in making these muffies!! Am I able to substitute LSA (linseed, sunflower, and almond) meal instead of flour? love the lack of added sugar and butter!!
Unfortunately not because this recipe relies on flour with gluten to rise.
FYI… I made these with King Arthur gluten free all purpose and they turned out great!
In the middle of making them and I don’t have applesauce what else can I use to replace ?
Oh, shoot. Plain yogurt would work, the higher fat content better but 0% is OK too.
Thank you !
We love this recipe and make it often! My kids LOVE muffins and I love making them more healthy and less sweet. Have you ever tried this as a loaf? Kind of craving banana bread today, but am afraid to test it out and have it fail!
Hi Laura. My kids will eat anything in a muffin form, I swear almost ANYTHING. So, I hear ya. I tried this recipe as a loaf and for some reason it didn’t work as well as muffins. However, I have this whole wheat flour banana bread recipe with rave reviews, so bake away.:) It has the same ingredients, just different ratios.
Oh perfect! They can help bake that one today! Thank you for your excellent recipes! And the quick response! 🙂 I figured you may have already tested it!
You are welcome. 🙂